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Thread: arrayList in a while loop
- 11-03-2011, 11:59 PM #1
arrayList in a while loop
I got a little bit of code I am kinda stuck with.
I got this arrayList where we stored a fasta file.
Fasta file example: >seq1 guguurguorgungun ionjlimlmo >seq2 jjkliuihlni >seq3 ppokkpdgstdcbch mdhdgsvtxtgsgwd jdbuydfyhedgy
But the problem is, how do I get it to take the next >seq...
I was thinking of letting it count++;
But overall, how can I find a certain ietm in the arrayList? (Like this ">")
I don't know if indexOf would help?
- 11-04-2011, 12:31 AM #2
Re: arrayList in a while loophow can I find a certain ietm in the arrayList? (Like this ">")
But if the '>' is embedded in a longer String or class, you will have to get each object in the list and look in the object's contents.
- 11-06-2011, 11:02 PM #3
Re: arrayList in a while loop
We now made a function getProtein. And what getProtein does is he takes every >seq and the lines below.
Now the idea was something like this:
int count = 0;
// Do something to continue to the next with getProtein function (>seq2 etc.)
Do you maybe have any idea on this one?
Like how to get the next >seq...
- 11-06-2011, 11:28 PM #4
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